featuresInRange

featuresInRange,SnpSet2,RangedDataCNV-method

RangedDataCNV-class

RangedDataHMM-class

RangedDataCNV

RangedDataHMM

RangedDataCBS

RangedDataCBS-class

RangedDataCopyNumber-class

state,RangedDataCNV-method

coverage2,RangedDataCNV-method

mean,RangedDataCBS-method

sampleNames,RangedDataCNV-method

chromosome,RangedDataCNV-method

findOverlaps,RangedDataCNV,SnpSet-method

findOverlaps,RangedDataCNV,CNSet-method

findOverlaps,RangedDataCNV,RangedDataCNV-method

findOverlaps,RangedDataHMM,RangedDataHMM-method

findOverlaps,RangedDataCNV,AnnotatedDataFrame-method

findOverlaps,AnnotatedDataFrame,RangedDataCNV-method

sampleNames<-,RangedDataCNV,character-method

The function, class, or data object you asked for has been
  deprecated.

internal

Deprecated

A package to analyze oligonucleotide arrays
        (expression/SNP/tiling/exon) at probe-level. It currently
        supports Affymetrix (CEL files) and NimbleGen arrays (XYS
        files).

Deprecated: oligoClasses Deprecated

Description

Arguments