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oligo (version 1.36.1)

batchStatistics: Accessor for batch statistics uses for copy number estimation and storage of model parameters

Description

The batchStatistics slot contains statistics estimated from each batch that are used to derive copy number estimates.

Usage

batchStatistics(object)
batchStatistics(object) <- value

Arguments

object
An object of class CNSet
value
An object of class AssayData

Value

  • batchStatics is an accessor for the slot batchStatistics that returns an object of class AssayData.

Details

An object of class AssayData for slot batchStatistics is initialized automatically when creating a new CNSet instance. Required in the call to new is a factor called batch whose unique values determine the number of columns for each assay data element.

See Also

CNSet-class, batchNames, batch