oligo (version 1.36.1)

pmFragmentLength: Access the fragment length for PM probes.

Description

Accessor to the fragment length for PM probes.

Usage

pmFragmentLength(object, enzyme, type=c('snp', 'cn'))

Arguments

object

PDInfo or SnpFeatureSet object.

enzyme

Enzyme to be used for query. If missing, all enzymes are used.

type

Type of probes to be used: 'snp' for SNP probes; 'cn' for Copy Number probes.

Value

• A list of length equal to the number of enzymes used for digestion. Each element of the list is a data.frame containing:
  • row: the row used to link to the PM matrix;
  • length: expected fragment length.