suggest_lod

It suggests a LOD Score for declaring statistical significance for two-point tests
for linkage between all pairs of markers, considering that multiple tests are being performed.

Analysis of molecular marker data from model (backcrosses,
F2 and recombinant inbred lines) and non-model systems (i. e.
outcrossing species). For the later, it allows statistical
analysis by simultaneously estimating linkage and linkage
phases (genetic map construction) according to Wu et al. (2002)
<doi:10.1006/tpbi.2002.1577>. All analysis are based on multipoint
approaches using hidden Markov models.

Cristiane Taniguti

onemap

Construction of Genetic Maps in Experimental Crosses

Gabriel Margarido

Marcelo Mollinari

Getulio Ferreira

Rodrigo Amadeu

Karl Broman

Katharine Preedy

Bastian Schiffthaler

Augusto Garcia

suggest_lod function

<dl><dt>x</dt>
<dd>an object of class <code>sequence</code> or <code>onemap</code></dd></dl>

Arguments

Suggests a LOD Score for two point tests — suggest_lod

<dl>

<dt>x</dt>
<dd>an object of class <code>sequence</code> or <code>onemap</code></dd>

</dl>

Suggests a LOD Score for two point tests

suggest_lod: Suggests a LOD Score for two point tests

Description

Usage

Value

Arguments

Details

Examples