edit_order_onemap

Edit sequence ordered by reference genome positions 
comparing to another set order

Analysis of molecular marker data from model (backcrosses,
F2 and recombinant inbred lines) and non-model systems (i. e.
outcrossing species). For the later, it allows statistical
analysis by simultaneously estimating linkage and linkage
phases (genetic map construction) according to Wu et al. (2002)
<doi:10.1006/tpbi.2002.1577>. All analysis are based on multipoint
approaches using hidden Markov models.

Cristiane Taniguti

onemap

Construction of Genetic Maps in Experimental Crosses

Gabriel Margarido

Marcelo Mollinari

Getulio Ferreira

Rodrigo Amadeu

Jeekin Lau

Karl Broman

Katharine Preedy

Bastian Schiffthaler

Augusto Garcia

edit_order_onemap function

<dl><dt>input.seq</dt>
<dd>object of class sequence with alternative order (not genomic order)</dd></dl>

Arguments

Cristiane Taniguti, <a href="/link/chtaniguti%40tamu.edu?package=onemap&version=3.2.0" data-mini-rdoc="onemap::chtaniguti@tamu.edu">chtaniguti@tamu.edu</a>

Author

Edit sequence ordered by reference genome positions 
comparing to another set order — edit_order_onemap

<dl>

<dt>input.seq</dt>
<dd>object of class sequence with alternative order (not genomic order)</dd>

</dl>

Cristiane Taniguti, <a href='mailto:chtaniguti@tamu.edu'>chtaniguti@tamu.edu</a>

edit_order_onemap: Edit sequence ordered by reference genome positions comparing to another set order

Description

Usage

Arguments

Author