openCyto (version 1.10.3)

add,GatingHierarchy,multipleFilterResult-method: bypass the default flowWorkspace:::.addGate

Description

to support adding gate along with indices without loading flow data and computing

to support adding rectangleGate yet gating through boolean operations without loading flow data

Usage

## S3 method for class 'GatingHierarchy,multipleFilterResult':
add(wf, action, name = NULL,
  ...)
## S3 method for class 'GatingHierarchy,logicalFilterResult':
add(wf, action, parent, name,
  recompute, ...)
## S3 method for class 'GatingHierarchy,ocRectangleGate':
add(wf, action, recompute, ...)
## S3 method for class 'GatingHierarchy,ocRectRefGate':
add(wf, action, recompute, ...)

Arguments

wf

GatingHierarchy see add in flowWorkspace package

action

ocRectangleGate or logicalFilterResult

name

character vector that specifies the names of populations generated by multipleFilterResult

...

see add in flowWorkspace package

parent

character parent node path (full or partial)

recompute

logical see add in flowWorkspace package

Details

however it is proven that logical indices are too big to be efficiently passed around