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ouch (version 2.20)
Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
Description
Fit and compare Ornstein-Uhlenbeck models for evolution along a phylogenetic tree.
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Install
install.packages('ouch')
Monthly Downloads
709
Version
2.20
License
GPL-3
Maintainer
Aaron King
Last Published
July 4th, 2024
Functions in ouch (2.20)
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paint
Painting regimes on a phylogenetic tree
update
Update and refit an
ouch
model
plot
ouch
plotting functions
summary
Summary methods
ouchtree
Phylogenetic tree object in
ouch
format
print
Print and show methods
simulate
Simulations of a phylogenetic trait model
ouch-package
Ornstein-Uhlenbeck methods for comparative phylogenetic hypotheses
logLik
Log likelihood of a fitted model
glssoln
Generalized least-squares solver
as_data_frame
Coerce an
ouch
object to a data frame
coef
Model coefficients
bootstrap
Bootstrapping for uncertainty quantification
anolis.ssd
Greater Antillean anolis lizard sexual size dimorphism data
geospiza
Data on Darwin's finches
bimac
Anolis bimaculatus lizard size data
hansen
Ornstein-Uhlenbeck models of trait evolution
brown
Phylogenetic Brownian motion models