SomaScan11k

datasets

internal

It aggregates protein panel data and metadata for protein quantitative
trait locus (pQTL) analysis using 'pQTLtools' (<https://jinghuazhao.github.io/pQTLtools/>).
The package includes data from affinity-based panels such as 'Olink' (<https://olink.com/>)
and 'SomaScan' (<https://somalogic.com/>), as well as mass spectrometry-based panels from
'CellCarta' (<https://cellcarta.com/>) and 'Seer' (<https://seer.bio/>). The metadata
encompasses updated annotations and publication details.

Jing Zhao

pQTLdata

A Collection of Proteome Panels and Meta-Data

Jing Hua Zhao

Uwe Ligges

Benjamin Altmann

SomaScan11k function

A data frame with 10,776 rows and 5 variables:<dl>
<dt><code>Sequence.ID</code></dt>
<dd>Sequence ID</dd><dt><code>Full.Name</code></dt>
<dd>Full name</dd><dt><code>Target.Name</code></dt>
<dd>Target name</dd><dt><code>UniProt.ID</code></dt>
<dd>UniProt ID</dd><dt><code>Entrez.Gene.Name</code></dt>
<dd>Entrez gene name</dd>
</dl>

Format

SomaScan 11k — SomaScan11k

A data frame with 10,776 rows and 5 variables:<dl>
<dt><code>Sequence.ID</code></dt>
<dd>Sequence ID</dd>

<dt><code>Full.Name</code></dt>
<dd>Full name</dd>

<dt><code>Target.Name</code></dt>
<dd>Target name</dd>

<dt><code>UniProt.ID</code></dt>
<dd>UniProt ID</dd>

<dt><code>Entrez.Gene.Name</code></dt>
<dd>Entrez gene name</dd>


</dl>

SomaScan 11k

SomaScan11k: SomaScan 11k

Description

Usage

Arguments

Format

Details