filterMinMarkers: Removes class/annotation information from a matrix of candidate
markers that appear in the fData.
Description
Removes annotation information that contain less that a
certain number/percentage of proteins
Usage
filterMinMarkers(object, n = 10, p, fcol = "GOAnnotations", verbose = TRUE)
Arguments
object
An instance of class MSnSet.
n
Minimum number of proteins allowed per column. Default is 10.
p
Minimum percentage of proteins per column.
fcol
The name of the matrix of marker information. Default is
GOAnnotations.
verbose
Number of marker candidates retained after filtering.
See Also
addGoAnnotations and example therein.