parsec (version 1.2.7)

AF2threshold: Poset threshold making the poset approach equivalent to the AF counting approach

Description

The function computes the threshold in the profile poset, which makes the poset approach equivalent to the AF counting approach, described in argument mpi.

Usage

AF2threshold(mpi, prof, zeta = NULL)

Arguments

mpi

an object of class ophi, see AF for details.

prof

an object of class wprof.

zeta

an object of class incidence.

See Also

AF

Examples

vl <- c(2, 3, 2)
prof <- var2prof(varlen = vl, labtype = "progressive")

res <- AF(prof, z = c(1, 2, 1), k = 1)

thr <- AF2threshold(res, prof)

plot(prof, col = 1 + thr, lwd = 1 + res$c,
     main = "Comparison between OPHI and parsec",
     sub = "bold: deprived profiles identified by OPHI, red: parsec threshold")

eval <- evaluation(prof, thr, maxint = 10^4, nit = 10^7)

ord <- order(eval$idn_f, res$c)
plot(eval$idn_f[ord], col = "red", lwd=2, type = "l", xlab="",
     ylab = "", axes = FALSE, frame.plot = TRUE,
     main = "Comparison between OPHI and parsec",
     sub = "red: identification function, black: OPHI deprived profiles")
points(res$c[ord], type="l", lwd=2)
axis(2)