go_all_pathways

<p>A list containing the descriptions for each human GO ontology category. This
data was retrieved on Nov 9, 2018.</p>

datasets

Pathway enrichment analysis enables researchers to uncover mechanisms
underlying the phenotype. pathfindR is a tool for pathway enrichment analysis
utilizing active subnetworks. It identifies active subnetworks in a
protein-protein interaction network using user-provided a list of genes.
It performs pathway enrichment analyses on the identified subnetworks.
pathfindR also offers functionalities to cluster enriched pathways and identify
representative pathways and to score the pathways per sample. The method is
described in detail in Ulgen E, Ozisik O, Sezerman OU. 2018. pathfindR: An R
Package for Pathway Enrichment Analysis Utilizing Active Subnetworks. bioRxiv.
<doi:10.1101/272450>.

Ege Ulgen

pathfindR

Pathway Enrichment Analysis Utilizing Active Subnetworks

go_all_pathways function

<p>list containing 5123 character values, the descriptions for the given
pathways.</p>

go_all_pathways: Gene Ontology - All Ontology Descriptions

Description

Usage

Arguments

Format