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pcutils

pcutils is a package that contains some useful functions for me, it offers a range of utilities and functions for everyday programming tasks.

The HTML documentation of the latest version is available at Github page.

Installation

The stable version is available on CRAN:

install.packages("pcutils")

Or you can install the development version of pcutils from GitHub with:

# install.packages("devtools")
devtools::install_github("Asa12138/pcutils")

Little tools

lib_ps, del_ps can library or detach packages gracefully
dabiao print a message `dabiao("Message",char = "

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Version

Install

install.packages('pcutils')

Monthly Downloads

495

Version

0.2.8

License

GPL-3

Issues

Pull Requests

Stars

Forks

Repository

https://github.com/Asa12138/pcutils

Maintainer

Peng Chen

Last Published

March 27th, 2025

Functions in pcutils (0.2.8)

Group your data

generate_labels

Generate labels position

is.ggplot.color

Judge if a characteristic is Rcolor

Scale a legend size

Get a legend from a ggplot object

Fit a linear model and plot

how_to_set_options

How to set options in a package

grepl.data.frame

Grepl applied on a data.frame

how_to_set_font_for_plot

How to set font for ggplot

lm_coefficients

Get coefficients of linear regression model

Multiple regression/ variance decomposition analysis

Multi-groups test

how_to_update_parameters

How to update parameters

how_to_use_parallel

How to use parallel

pcutils-package

pcutils: Some Useful Functions for Statistics and Visualization

Convert a distance matrix to a data frame

df to link table

ggmosaic for mosaic plot

Make a new python package

Group your data

Plot a multi-pages pdf

how_to_use_sbatch

How to use sbatch

Plot a doughnut chart

prepare_package

Prepare a package

gghuan2 for multi-doughnut chart

igraph_translator

Translate text of igraph

My Sunburst plot

My Treemap plot

Read some special format file

Search and browse the web for specified terms

Attach packages or install packages have not benn installed

my_circle_packing

My Circle packing plot

Show my little cat named Guo Dong which drawn by my girlfriend.

list_to_dataframe

Trans list (with NULL) to data.frame

gsub.data.frame

Gsub applied on a data.frame

Filter your data

Read fasta file

Prepare a numeric string

Get a ggplot xlim and ylim

Match otutab and metadata

Trans format your data

Replace a vector by named vector

set_pcutils_config

Plot a general venn (upset, flower)

Update the parameters

plot.coefficients

Plot coefficients as a bar chart or lollipop chart

Remove the low relative items in each column

Squash one column in a data.frame using other columns as id.

Transform a rgb vector to a Rcolor code

Plot a stack plot

Make a R-analysis project

Make a Gitbook using bookdown

test data for pcutils package

test data for pcutils package

Update the NEW.md for a package

remove.outliers

Remove outliers

show_pcutils_config

Scale a fill color

my_voronoi_treemap

My Voronoi treemap plot

test data for pcutils package

Plot the sampling map

Split text into parts, each not exceeding a specified character count

Three-line table

Scale a fill color

Transpose data.frame

Split Composite Names

Write a data.frame to fasta

Transfer the format of file

Add an analysis for a project

Like uniq -c in shell to count a vector

Add a global gg_theme and colors for plots

Add alpha for a Rcolor

Copy a data.frame

Change factor levels

Print some message with =

check_directory_structure

Check if a directory structure matches the expected structure

download_ncbi_genome_file

Download genome files from NCBI based on accession number

Detach packages

Fit a distribution

Explode a data.frame if there are split charter in one column

Convert Three-column Data to Distance Matrix

ggplot_translator

Translate axis label of a ggplot

Performs multiple mean comparisons for a data.frame