findStationary

Finds the stationary distribution of allele frequencies, if it exists, w.r.t. a given mutation matrix.

A collection of functions for modelling mutations in
pedigrees with marker data, as used e.g. in likelihood computations
with microsatellite data. Implemented models include equal,
proportional and stepwise models, as well as random models for
experimental work, and custom models allowing the user to apply any
valid mutation matrix. Allele lumping is done following the
lumpability criteria of Kemeny and Snell (1976), ISBN:0387901922.

Magnus Vigeland

pedmut

Mutation Models for Pedigree Likelihood Computations

Magnus Dehli Vigeland

Thore Egeland

findStationary function

<dl><dt>mutmat</dt>
<dd>A mutation matrix.</dd></dl>

Arguments

Find the stationary frequency distribution — findStationary

<dl>

<dt>mutmat</dt>
<dd>A mutation matrix.</dd>

</dl>

findStationary: Find the stationary frequency distribution

Description

Usage

Value

Arguments

Examples