maxRate

Upper limits for overall mutation rate for the stepwise reversible model.

A collection of functions for modelling mutations in
pedigrees with marker data, as used e.g. in likelihood computations
with microsatellite data. Implemented models include equal,
proportional and stepwise models, as well as random models for
experimental work, and custom models allowing the user to apply any
valid mutation matrix. Allele lumping is done following the
lumpability criteria of Kemeny and Snell (1976), ISBN:0387901922.

Magnus Vigeland

pedmut

Mutation Models for Pedigree Likelihood Computations

Magnus Dehli Vigeland

Thore Egeland

maxRate function

<dl><dt>alleles</dt>
<dd>A character vector with allele labels.</dd>
<dt>afreq</dt>
<dd>A numeric vector of allele frequencies.</dd>
<dt>range</dt>
<dd>A positive number.</dd></dl>

Arguments

Author

Upper limits for overall mutation rate for the stepwise reversible model. — maxRate

<dl>

<dt>alleles</dt>
<dd>A character vector with allele labels.</dd>


<dt>afreq</dt>
<dd>A numeric vector of allele frequencies.</dd>


<dt>range</dt>
<dd>A positive number.</dd>

</dl>

maxRate: Upper limits for overall mutation rate for the stepwise reversible model.

Description

Usage

Value

Arguments

Author