print.ped

Print a <code>ped</code> object using original labels.

A comprehensive collection of tools for creating,
manipulating and visualising pedigrees and genetic marker data.
Pedigrees can be read from text files or created on the fly with
built-in functions. A range of utilities enable modifications like
adding or removing individuals, breaking loops, and merging pedigrees.
An online tool for creating pedigrees interactively, based on
'pedtools', is available at <https://magnusdv.shinyapps.io/quickped>.
'pedtools' is the hub of the 'pedsuite', a collection of packages for
pedigree analysis. A detailed presentation of the 'pedsuite' is given
in the book 'Pedigree Analysis in R' (Vigeland, 2021,
ISBN:9780128244302).

Magnus Vigeland

pedtools

Creating and Working with Pedigrees and Marker Data

Magnus Dehli Vigeland

print.ped function

<dl><dt>x</dt>
<dd>object of class <code>ped</code>.</dd>
<dt>...</dt>
<dd>(optional) arguments passed on to <code><a href="/link/print.data.frame()?package=pedtools&version=2.8.0" data-mini-rdoc="pedtools::print.data.frame()">print.data.frame()</a></code>.</dd>
<dt>markers</dt>
<dd>(optional) vector of marker indices. If missing, and <code>x</code> has
less than 10 markers, they are all displayed. If <code>x</code> has 10 or more
markers, the first 5 are displayed.</dd>
<dt>verbose</dt>
<dd>If TRUE, a message is printed if only the first 5 markers are
printed. (See above).</dd></dl>

Arguments

Printing pedigrees — print.ped

<dl>

<dt>x</dt>
<dd>object of class <code>ped</code>.</dd>


<dt>...</dt>
<dd>(optional) arguments passed on to <code><a href='https://rdrr.io/r/base/print.dataframe.html'>print.data.frame()</a></code>.</dd>


<dt>markers</dt>
<dd>(optional) vector of marker indices. If missing, and <code>x</code> has
less than 10 markers, they are all displayed. If <code>x</code> has 10 or more
markers, the first 5 are displayed.</dd>


<dt>verbose</dt>
<dd>If TRUE, a message is printed if only the first 5 markers are
printed. (See above).</dd>

</dl>

print.ped: Printing pedigrees

Description

Usage

Arguments

Details