pergola (version 1.0)

pairwRF: Pairwise recombination frequency calculation

Description

Calculates the pairwise recombination frequencies for two given markers. Heuristic approach, assuming minimal recombination between markers.

Usage

pairwRF(input, ploidy = 4, na.penalty = 0)

Arguments

input

Matrix with two rows of genotypes. Each row is one marker.

ploidy

Ploidy level of the organism.

Value

Numeric value of recomination between the two markers.