drop_tip

An <code><a href="/link/phylo?package=pez&version=1.0-0&to=ape%3Aphylo" rd-options="ape:phylo" data-mini-rdoc="ape:phylo::phylo">phylo</a></code> object

tree

A vector of species (one, many, or none) to be removed
from <code>tree</code>

This is a weak wrapper around <code>ape</code>'s
<code><a href="/link/drop.tip?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::drop.tip">drop.tip</a></code>. Importantly, if asked to drop no species
from a phylogeny, it will just return the phylogeny (not an empty
phylogeny, as <code><a href="/link/drop.tip?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::drop.tip">drop.tip</a></code>) will.

Eco-phylogenetic and community phylogenetic analyses.
    Keeps community ecological and phylogenetic data matched up and
    comparable using 'comparative.comm' objects. Wrappers for common
    community phylogenetic indices ('shape', 'evenness', 'dispersion',
    and 'dissimilarity' metrics). Implementation of Cavender-Bares
    (2004) correlation of phylogenetic and ecological matrices
    ('fingerprint.regression'). Phylogenetic Generalised Linear Mixed
    Models (PGLMMs) following ('pglmm') following Ives & Helmus (2011)
    and Rafferty & Ives (2013). Simulation of null assemblages,
    traits, and phylogenies ('scape', 'sim.meta.comm').

drop_tip: Trim a phylogeny

Description

Usage

Arguments

Value

See Also