princompOne

traitgram.cc

A <code><a href="/link/comparative.comm?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::comparative.comm">comparative.comm</a></code> object.

object

Which trait to plot.  If <code><a href="/link/missing?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::missing">missing</a></code>, use
the first trait.  If a positive <code><a href="/link/numeric?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::numeric">numeric</a></code> vector of
<code><a href="/link/length?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::length">length</a></code> one, use the <

trait

List of more arguments to pass on to <code>trait</code>
(if its a <code><a href="/link/function?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::function">function</a></code>).

moreArgs

Additional arguments to be passed on to
<code><a href="/link/traitgram?package=pez&version=1.0-0&to=picante%3Atraitgram" rd-options="picante:traitgram" data-mini-rdoc="picante:traitgram::traitgram">traitgram</a></code> or <code>prcomp</code> for
<code>traitgram.cc</code> and <code>princomOne</code> respectively.

<code>traitgram.cc</code> A wrapper for the
<code><a href="/link/traitgram?package=pez&version=1.0-0&to=picante%3Atraitgram" rd-options="picante:traitgram" data-mini-rdoc="picante:traitgram::traitgram">traitgram</a></code> function in the
<code>picante</code> package.<p></p><p>A very soft wrapper for <code><a href="/link/princomp?package=pez&version=1.0-0" rd-options="" data-mini-rdoc="pez::princomp">princomp</a></code></p>

Eco-phylogenetic and community phylogenetic analyses.
    Keeps community ecological and phylogenetic data matched up and
    comparable using 'comparative.comm' objects. Wrappers for common
    community phylogenetic indices ('shape', 'evenness', 'dispersion',
    and 'dissimilarity' metrics). Implementation of Cavender-Bares
    (2004) correlation of phylogenetic and ecological matrices
    ('fingerprint.regression'). Phylogenetic Generalised Linear Mixed
    Models (PGLMMs) following ('pglmm') following Ives & Helmus (2011)
    and Rafferty & Ives (2013). Simulation of null assemblages,
    traits, and phylogenies ('scape', 'sim.meta.comm').

traitgram.cc: Traitgram for comparative community object

Description

Usage

Arguments

Value