phangorn-package: Phylogenetic analysis in R
Description
Phylogenetic analysis in R (Estimation of phylogenetic
trees and networks using Maximum Likelihood, Maximum Parsimony,
Distance methods & Hadamard conjugation)
The complete list of functions can be displayed with library(help = phangorn).
Further information is available in two vignettes.
ll{
Trees Constructing phylogenetic trees (source, pdf)
phangorn-specials Advanced features (source, pdf)
}
The first vignette (to display type vignette('Trees')) gives an introduction in phylogenetic analysis with phangorn, and
the second vignette covers more advanced feature like defining special character spaces.