phangorn (version 2.12.1)

cophenetic.networx: Pairwise Distances from a Phylogenetic Network

Description

cophenetic.networx computes the pairwise distances between the pairs of tips from a phylogenetic network using its branch lengths.

Usage

# S3 method for networx
cophenetic(x)

Value

an object of class dist, names are set according to the tip labels (as given by the element tip.label of the argument x).

Arguments

x

an object of class networx.

Author

Klaus Schliep

See Also

cophenetic for the generic function, neighborNet to construct a network from a distance matrix

Examples

example(neighborNet)
cophenetic(nnet)