phangorn (version 2.12.1)

threshStateC: Internal phangorn Functions

Description

Internal phangorn functions.

Usage

threshStateC(x, thresholds)
candidate_tree(x, method = c("unrooted", "ultrametric", "tipdated"),
  eps = 1e-08, tip.dates = NULL, ...)
hash(x, ...)
map_duplicates(x, dist = length(x) < 500, ...)
coords(obj, dim = "3D")
pmlPen(object, lambda, ...)