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photobiologyPlants (version 0.5.0)

CRYs.mspct: CRY1, CRY2 and CRY3 absorbance spectra.

Description

A dataset containing the wavelengths at an arbitrary nm interval and spectral absorbance for plant cryptochromes 1 (CRY1), 2 (CRY2), and 3 (CRY3 or CRY-DASH). Tabulated values for the in vitro absorbance spectrum for Arabidopsis thaliana. CRY1 data were digitized from figure 1, curve "dark" and curve "30 min illumination" in Zeugnwer et al. (2005). The CRY2 data were digitized from Figure 1.B, curve "dark adapted sample", and curve "irradiated with blue light (450 nm, 50 umol m-2 s-1) during 30 min" in Banerjee et al. (2007). CRY3 data were digitized from figure 2a, curve "cry3" in Song et al. (2006).

Arguments

Format

A filter_mspct with five member filter_spct objects each with 300 rows and 2 numeric variables, w.length and A

Details

The variables of the member spectra are as follows:

  • w.length (nm)

  • A (spectral absorbance)

References

Banerjee, R., Schleicher, E., Meier, S., Viana, R. M., Pokorny, R., Ahmad, M., ... Batschauer, A. (2007) The signaling state of Arabidopsis cryptochrome 2 contains flavin semiquinone. J Biol Chem, 282(20), 14916-14922. doi:10.1074/jbc.M700616200

SONG, S.-H., B. DICK, , A. PENZKOFER, , R. POKORNY, , A. BATSCHAUER, L.-O. ESSEN (2006) Absorption and fluorescence spectroscopic characterization of cryptochrome 3 from Arabidopsis thaliana. Journal of Photochemistry and Photobiology B: Biology. 85(1):1-16.

ZEUGNER, A., MARTIN BYRDIN, JEAN-PIERRE BOULY, NADIA BAKRIM, BALDISSERA GIOVANI, KLAUS BRETTEL, MARGARET AHMAD (2005) Light-induced Electron Transfer in Arabidopsis Cryptochrome-1 Correlates with in Vivo Function. Journal of Biological Chemistry. 280(20):19437-19440.