photobiologyWavebands (version 0.5.2)

Far_red: Constructor of far-red waveband

Description

Wavelength-range definitions for far-red light according as commonly used in plant or remote sensing applications.

Usage

Far_red(std = "ISO")

Value

A waveband object defining a wavelength range.

Arguments

std

a character string, defaults to "ISO", as for other colour definitions, which in this case returns NA.

Details

The different arguments passed to formal parameter std determine the range of wavelengths set as boundaries of the returned waveband object; far-red in not defined by "ISO" standard definitions based on human colour vision, and included under red; "Smith10", "Smith20", "Inada", "Warrington", "Sellaro" and "Broad" are non-standard but used in plant sciences; "RedEdge40" and "RedEdge40" are non-standard but frequently used in remote sensing.

In plant photobiology the definitions proposed by Prof. Harry Smith are the most widely used, specially to compute a red to far-red photon ratio relevant to phytochrome photoreceptors. However, other authors have used different definitions in their publications. "Smith10" (725-735 nm), "Smith20" (720-740 nm), "Inada" (700-800 nm), "Warrington" (700-850 nm), and "Sellaro" (700-750 nm).

Other definitions used in remote sensing. For example the "red edge" is to detect the condition of vegetation based on light reflectance by green vegetation. These bands are centred at the reflectance transition in the far-red band (725 nm), and here we define "RedEdge40" (705-745 nm) and "RedEdge20" (715-735 nm).

References

Aphalo, P. J., Albert, A., Björn, L. O., McLeod, A. R., Robson, T. M., Rosenqvist, E. (Eds.). (2012). Beyond the Visible: A handbook of best practice in plant UV photobiology (1st ed., p. xxx + 174). Helsinki: University of Helsinki, Department of Biosciences, Division of Plant Biology. ISBN 978-952-10-8363-1 (PDF), 978-952-10-8362-4 (paperback). Open access PDF download available at tools:::Rd_expr_doi("10.31885/9789521083631").

ISO (2007) Space environment (natural and artificial) - Process for determining solar irradiances. ISO Standard 21348. ISO, Geneva.

Murakami, K., Aiga I. (1994) Red/Far-red photon flux ratio used as an index number for morphological control of plant growth under artificial lighting conditions. Proc. Int. Symp. Artificial Lighting, Acta Horticulturae, 418, ISHS 1997.

Sellaro, R., Crepy, M., Trupkin, S. A., Karayekov, E., Buchovsky, A. S., Rossi, C., & Casal, J. J. (2010). Cryptochrome as a sensor of the blue/green ratio of natural radiation in Arabidopsis. Plant physiology, 154(1), 401-409. tools:::Rd_expr_doi("10.1104/pp.110.160820").

Smith, H. (1982) Light quality, photoperception and plant strategy. Annual Review of Plant Physiology, 33:481-518. tools:::Rd_expr_doi("10.1146/annurev.pp.33.060182.002405")

See Also

NIR for wavebands close to the boundary between red and infrared regions.

waveband

Other unweighted wavebands: Blue(), Green(), IR(), Orange(), Purple(), Red(), UVA(), UVB(), UVC(), UV(), VIS(), Yellow()

Examples

Far_red() # no ISO definition exists
Far_red("ISO") # no ISO definition exists
Far_red("Smith10") # 10 nm wide
Far_red("Smith20") # 20 nm wide
Far_red("Inada")
Far_red("Warrington")
Far_red("Sellaro")
Far_red("RedEdge40")
Far_red("RedEdge20")

e_irrad(sun.spct, Far_red("Smith10")) # W m-2
q_irrad(sun.spct, Far_red("Smith10")) # mol m-2
q_irrad(sun.spct, Far_red("Smith10"), scale.factor = 1e6) # umol m-2