pruningwise.distFromRoot

Calculates the distance from the root to all nodes, in
 a tree whose internal representation is in "pruningwise" order.

Provides functions for fitting phylogenetic linear models and phylogenetic generalized linear models. The computation uses an algorithm that is linear in the number of tips in the tree. The package also provides functions for simulating continuous or binary traits along the tree. Other tools include functions to test the adequacy of a population tree.

Lam Si Tung Ho

phylolm

Phylogenetic Linear Regression

Cecile Ane

Robert Lachlan

Kelsey Tarpinian

Rachel Feldman

Qing Yu

Wouter van der Bijl

Joan Maspons

Rutger Vos

Paul Bastide

pruningwise.distFromRoot function

<dl> <dt>phy</dt>
<dd>a phylogenetic tree of type phylo with branch
 lengths, already in "pruningwise" order.</dd></dl>

Arguments

Author

Calculates node distance from the root in
  an "pruningwise" tree — pruningwise.distFromRoot

<dl>

 <dt>phy</dt>
<dd>a phylogenetic tree of type phylo with branch
 lengths, already in "pruningwise" order.</dd>

</dl>

Calculates node distance from the root in
  an "pruningwise" tree

pruningwise.distFromRoot: Calculates node distance from the root in an "pruningwise" tree

Description

Usage

Value

Arguments

Author

See Also

Examples