phyloSimSignal

This function crosses traits data with simulations to estimate the phylogenetic signal as a
fraction of a Brownian Motion process. This is experimental.

A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.

Francois Keck

phylosignal

Exploring the Phylogenetic Signal in Continuous Traits

phyloSimSignal function

<dl><dt>p4d</dt>
<dd>a <code>phylo4d</code> object.</dd>
<dt>phylosim</dt>
<dd>a <code>phylosim</code> object.</dd>
<dt>quantiles</dt>
<dd>a vector of two numeric values between 0 and 1 giving the minimum
and the maximum quantiles to estimate statistics fluctuations.</dd></dl>

Arguments

Phylogenetic signal estimation as a fraction of a Brownian Motion process. — phyloSimSignal

<dl>

<dt>p4d</dt>
<dd>a <code>phylo4d</code> object.</dd>


<dt>phylosim</dt>
<dd>a <code>phylosim</code> object.</dd>


<dt>quantiles</dt>
<dd>a vector of two numeric values between 0 and 1 giving the minimum
and the maximum quantiles to estimate statistics fluctuations.</dd>

</dl>

phyloSimSignal: Phylogenetic signal estimation as a fraction of a Brownian Motion process.

Description

Usage

Value

Arguments

See Also