This function adds node, edge, or tip labels to the plotted trees of a "cophylo" object.
nodelabels.cophylo(..., which=c("left","right"))
edgelabels.cophylo(..., which=c("left","right"))
tiplabels.cophylo(..., which=c("left","right"))
arguments to be passed to nodelabels, edgelabels, or tiplabels.
argument indicated which of the two plotted trees (the "left" or "right" tree) to be used.
Liam Revell liam.revell@umb.edu
Note that the order of tips, edges, and nodes may be different in the object of class "cophylo" than they are in the original input trees, particularly if cophylo(...,rotate=TRUE) was used.
Paradis, E., J. Claude, and K. Strimmer (2004) APE: Analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289-290.
Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.
cophylo, edgelabels, nodelabels, tiplabels