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picasso (version 1.3.1)

Pathwise Calibrated Sparse Shooting Algorithm

Description

Computationally efficient tools for fitting generalized linear model with convex or non-convex penalty. Users can enjoy the superior statistical property of non-convex penalty such as SCAD and MCP which has significantly less estimation error and overfitting compared to convex penalty such as lasso and ridge. Computation is handled by multi-stage convex relaxation and the PathwIse CAlibrated Sparse Shooting algOrithm (PICASSO) which exploits warm start initialization, active set updating, and strong rule for coordinate preselection to boost computation, and attains a linear convergence to a unique sparse local optimum with optimal statistical properties. The computation is memory-optimized using the sparse matrix output.

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Version

Install

install.packages('picasso')

Monthly Downloads

334

Version

1.3.1

License

GPL-3

Maintainer

Last Published

February 21st, 2019

Functions in picasso (1.3.1)

eyedata

The Bardet-Biedl syndrome Gene expression data from Scheetz et al. (2006)
coef.poisson

Extract Model Coefficients for an object with S3 class "poisson"
coef.sqrtlasso

Extract Model Coefficients for an object with S3 class "sqrtlasso"
plot.sqrtlasso

Plot Function for "sqrtlasso"
predict.poisson

Prediction for an object with S3 class "poisson"
print.gaussian

Print Function for an object with S3 class "gaussian"
predict.gaussian

Prediction for an object with S3 class "gaussian"
print.logit

Print Function for an object with S3 class "logit"
print.poisson

Print Function for an object with S3 class poisson
plot.logit

Plot Function for "logit"
plot.poisson

Plot Function for "poisson"
coef.gaussian

Extract Model Coefficients for an object with S3 class "gaussian"
coef.logit

Extract Model Coefficients for an object with S3 class "logit"
picasso

PathwIse CAlibrated Sparse Shooting algOrithm (PICASSO)
plot.gaussian

Plot Function for "gaussian"
predict.logit

Prediction for an object with S3 class "logit"
predict.sqrtlasso

Prediction for an object with S3 class "sqrtlasso"
print.sqrtlasso

Print Function for an object with S3 class "sqrtlasso"
picasso-package

PICASSO: PathwIse CAlibrated Sparse Shooting algOrithm