plantecophys (version 1.4-6)

Modelling and Analysis of Leaf Gas Exchange Data

Description

Coupled leaf gas exchange model, A-Ci curve simulation and fitting, Ball-Berry stomatal conductance models, leaf energy balance using Penman-Monteith, Cowan-Farquhar optimization, humidity unit conversions. See Duursma (2015) .

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Version

Install

install.packages('plantecophys')

Monthly Downloads

506

Version

1.4-6

License

GPL

Maintainer

Remko Duursma

Last Published

March 31st, 2021

Functions in plantecophys (1.4-6)

acidata1

An example A-Ci curve

PhotosynEB

Coupled leaf gas exchange model with energy balance

fitBB

Fit Ball-Berry type models of stomatal conductance

AciC4

C4 Photosynthesis

RHtoVPD

Conversions between relative humidity, vapour pressure deficit and dewpoint

FARAO

FARquhar And Opti

PhotosynTuzet

Coupled leaf gas exchange model with Tuzet stomatal conductance

findCiTransition

Calculate transition points for fitted A-Ci curves

fitBBs

Fit Ball-Berry type models of stomatal conductance to many groups at once

Photosyn

Coupled leaf gas exchange model

manyacidat

An example dataset with multiple A-Ci curves

plantecophys-package

plantecophys

fitacis

Fit multiple A-Ci curves at once

fitaci

Fit the Farquhar-Berry-von Caemmerer model of leaf photosynthesis