polyRAD (version 1.1)

CanDoGetWeightedMeanGeno: Check Whether GetWeightedMeanGenotypes Can Be Run

Description

This function is used internally by AddPCA, AddAlleleFreqByTaxa, and the internal function .alleleFreq to test whether GetWeightedMeanGenotypes can be run on a "RADdata" object.

Usage

CanDoGetWeightedMeanGeno(object, ...)

Arguments

object

A "RADdata" object.

…

Additional arguments (none implemented).

Value

A single Boolean value. To be TRUE, object$posteriorProb must be non-null, and either there must be only one possible ploidy, or object$ploidyChiSq must be non-null.

See Also

AddGenotypePosteriorProb, AddPloidyChiSq

Examples

# NOT RUN {
data(exampleRAD)

CanDoGetWeightedMeanGeno(exampleRAD)

exampleRAD <- AddAlleleFreqHWE(exampleRAD)
exampleRAD <- AddGenotypePriorProb_HWE(exampleRAD)
exampleRAD <- AddGenotypeLikelihood(exampleRAD)
exampleRAD <- AddPloidyChiSq(exampleRAD)
exampleRAD <- AddGenotypePosteriorProb(exampleRAD)

CanDoGetWeightedMeanGeno(exampleRAD)
# }