polyRAD (version 1.6)

CanDoGetWeightedMeanGeno: Check Whether GetWeightedMeanGenotypes Can Be Run

Description

This function is used internally by AddPCA, AddAlleleFreqByTaxa, and the internal function .alleleFreq to test whether GetWeightedMeanGenotypes can be run on a "RADdata" object.

Usage

CanDoGetWeightedMeanGeno(object, ...)

Value

A single Boolean value. To be TRUE, object$posteriorProb must be non-null, and either there must be only one possible ploidy, or object$ploidyChiSq must be non-null.

Arguments

object

A "RADdata" object.

...

Additional arguments (none implemented).

Author

Lindsay V. Clark

See Also

AddGenotypePosteriorProb, AddPloidyChiSq

Examples

data(exampleRAD)

CanDoGetWeightedMeanGeno(exampleRAD)

exampleRAD <- AddAlleleFreqHWE(exampleRAD)
exampleRAD <- AddGenotypePriorProb_HWE(exampleRAD)
exampleRAD <- AddGenotypeLikelihood(exampleRAD)
exampleRAD <- AddPloidyChiSq(exampleRAD)
exampleRAD <- AddGenotypePosteriorProb(exampleRAD)

CanDoGetWeightedMeanGeno(exampleRAD)