ExpHet_site

Computes the expected heterozygosity for a given site.

internal

Simulates pooled sequencing data under a variety of conditions.
Also allows for the evaluation of the average absolute difference between allele frequencies
computed from genotypes and those computed from pooled data.
Carvalho et al., (2022) <doi:10.1101/2023.01.20.524733>.

João Carvalho

poolHelper

Simulates Pooled Sequencing Genetic Data

Vítor Sousa

ExpHet_site function

<dl><dt>geno_site</dt>
<dd>is a vector where each entry contains the genotype for a
single individual, coded as 0,1,2 and using NA for the missing data.</dd></dl>

Arguments

Compute expected heterozygosity per site — ExpHet_site

<dl>

<dt>geno_site</dt>
<dd>is a vector where each entry contains the genotype for a
single individual, coded as 0,1,2 and using NA for the missing data.</dd>

</dl>

ExpHet_site: Compute expected heterozygosity per site

Description

Usage

Value

Arguments