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popbio (version 2.8)

varEst: Estimate the variance of beta-binomial vital rates

Description

Finds the best estimates of mean and environmental variance for beta-binomial vital rates using the approximation method of Akcakaya (2002)

Usage

varEst(rates, weighted = 1)

Value

A matrix with 3 columns: (1) total observed variance, (2) estimate of variance due to demographic stochasticity, and (3) estimate of variance due to environmental stochasticity.

Arguments

rates

a matrix or dataframe with four columns: Rate identifier, Year, Total number of starting individuals, Number surviving (or growing)

weighted

either 1 for weighted average demographic variance, or 0 for unweighted average, default is 1

Author

Patrick Nantel, 20 June 2005. Last modified May 1st 2007.

References

Akcakaya, H. R. 2002. Estimating the variance of survival rates and fecundities. Animal Conservation 5: 333-336.

Kendall, B. E. 1998. Estimating the magnitude of environmental stochasticity in survivorship data. Ecological Applications 8(1): 184-193.

See Also

Kendall

Examples

Run this code
varEst(woodpecker)

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