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popkin (version 1.2.2)

inbrDiag: Deprecated functions in package popkin.

Description

The functions listed below are deprecated and will be defunct in the near future. When possible, alternative functions with similar functionality are also mentioned. Help pages for deprecated functions are available at help("-deprecated").

Usage

inbrDiag(kinship)
neff(kinship, max = TRUE, w = NULL, retW = TRUE, nonneg = TRUE,
  algo = c("gradient", "newton", "heuristic"), tol = 1e-10)
plotPopkin(x, colCont, coln = 100, xMar = NULL, marPad = 0.2,
  diagLine = FALSE, panelLetters = toupper(letters),
  panelLetterCex = 1.5, ylabAdj = NA, ylabLine = 0,
  addLayout = TRUE, nr = 1, legTitle = "Kinship", legMar = NULL,
  nPretty = 5, showNames = FALSE, namesCex = 1, namesLine = NA,
  labsCex = 1, labsLas = 0, labsLine = 0, labsSkipLines = FALSE,
  labsLwd = 1, labsCol = "black", labsDoTicks = FALSE,
  labsDoText = TRUE, labsEven = FALSE, ...)
rescalePopkin(kinship, subpops = NULL, min_kinship = NA)
weightsSubpops(subpops)

Arguments

<code>inbrDiag</code>

For inbrDiag, use inbr_diag.

<code>neff</code>

For neff, use n_eff.

<code>plotPopkin</code>

For plotPopkin, use plot_popkin. Several argument names have also changed!

<code>rescalePopkin</code>

For rescalePopkin, use rescale_popkin.

<code>weightsSubpops</code>

For weightsSubpops, use weights_subpops.