de_novo

This function computes the mass differences of MS2 peaks and matches the 'delta masses' to the amino acid weights.

Helps with quality checks, visualizations
and analysis of mass spectrometry data, coming from proteomics
experiments. The package is developed, tested and used at the Functional
Genomics Center Zurich <https://fgcz.ch>. We use this package
mainly for prototyping, teaching, and having fun with proteomics data.
But it can also be used to do data analysis for small scale data sets.

Christian Panse

protViz

Visualizing and Analyzing Mass Spectrometry Related Data in
Proteomics

Jonas Grossmann

Simon Barkow-Oesterreicher

de_novo function

Arguments

Christian Panse 2013

Author

de-novo on tandem ms — de_novo

de_novo: de-novo on tandem ms

Description

Usage

Arguments

Author

Details

Examples