AAMOE3D

<p>This dataset includes the 3D descriptors of the 20 amino acids
calculated by MOE 2011.10 used for scales extraction in this package.
All amino acid molecules had also been optimized with MOE (semiempirical AM1)
before calculating these 3D descriptors.
The SDF file containing the information of the optimized amino acid molecules
is included in this package. See <code>OptAA3d</code> for more information.</p>

Comprehensive toolkit for generating various numerical
features of protein sequences described in Xiao et al. (2015)
<DOI:10.1093/bioinformatics/btv042>. For full functionality,
the software 'ncbi-blast+' is needed, see
<https://blast.ncbi.nlm.nih.gov/doc/blast-help/downloadblastdata.html>
for more information.

Nan Xiao

protr

Generating Various Numerical Representation Schemes for Protein
Sequences

Qing-Song Xu

Dong-Sheng Cao

Sebastian Mueller

AAMOE3D function

3D Descriptors for 20 Amino Acids calculated by MOE 2011.10 — AAMOE3D

3D Descriptors for 20 Amino Acids calculated by MOE 2011.10

AAMOE3D: 3D Descriptors for 20 Amino Acids calculated by MOE 2011.10

Description

Arguments

Examples