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protr (version 1.7-4)

extractTC: Tripeptide Composition Descriptor

Description

This function calculates the Tripeptide Composition descriptor (dim: 8,000).

Usage

extractTC(x)

Value

A length 8,000 named vector

Arguments

x

A character vector, as the input protein sequence.

Author

Nan Xiao <https://nanx.me>

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractAAC and extractDC for Amino Acid Composition and Dipeptide Composition descriptors.

Examples

Run this code
x <- readFASTA(system.file("protseq/P00750.fasta", package = "protr"))[[1]]
extractTC(x)

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