pscl (version 1.5.2)

odTest: likelihood ratio test for over-dispersion in count data

Description

Compares the log-likelihoods of a negative binomial regression model and a Poisson regression model.

Usage

odTest(glmobj, alpha=.05, digits = max(3, getOption("digits") - 3))

Arguments

glmobj

an object of class negbin produced by glm.nb

alpha

significance level of over-dispersion test

digits

number of digits in printed output

Value

None; prints results and returns silently

Details

The negative binomial model relaxes the assumption in the Poisson model that the (conditional) variance equals the (conditional) mean, by estimating one extra parameter. A likelihood ratio (LR) test can be used to test the null hypothesis that the restriction implicit in the Poisson model is true. The LR test-statistic has a non-standard distribution, even asymptotically, since the negative binomial over-dispersion parameter (called theta in glm.nb) is restricted to be positive. The asymptotic distribution of the LR (likelihood ratio) test-statistic has probability mass of one half at zero, and a half \(\chi^2_1\) distribution above zero. This means that if testing at the \(\alpha\) = .05 level, one should not reject the null unless the LR test statistic exceeds the critical value associated with the \(2\alpha\) = .10 level; this LR test involves just one parameter restriction, so the critical value of the test statistic at the \(p\) = .05 level is 2.7, instead of the usual 3.8 (i.e., the .90 quantile of the \(\chi^2_1\) distribution, versus the .95 quantile).

A Poisson model is run using glm with family set to link{poisson}, using the formula in the negbin model object passed as input. The logLik functions are used to extract the log-likelihood for each model.

References

A. Colin Cameron and Pravin K. Trivedi (1998) Regression analysis of count data. New York: Cambridge University Press.

Lawless, J. F. (1987) Negative Binomial and Mixed Poisson Regressions. The Canadian Journal of Statistics. 15:209-225.

See Also

glm.nb, logLik

Examples

# NOT RUN {
data(bioChemists)
modelnb <- MASS::glm.nb(art ~ .,
                 data=bioChemists,
                 trace=TRUE)
odTest(modelnb)
# }