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pscore (version 0.4.0)

Standardizing Physiological Composite Risk Endpoints

Description

Provides a number of functions to simplify and automate the scoring, comparison, and evaluation of different ways of creating composites of data. It is particularly aimed at facilitating the creation of physiological composites of metabolic syndrome symptom score (MetSSS) and allostatic load (AL). Provides a wrapper to calculate the MetSSS on new data using the Healthy Hearts formula.

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Install

install.packages('pscore')

Monthly Downloads

175

Version

0.4.0

License

LGPL-3

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Repository

https://github.com/JWiley/score-project

Homepage

https://score-project.org

Maintainer

Last Published

May 13th, 2022

Functions in pscore (0.4.0)

An constructor function for the S4 CompositeReady class

CompositeReady-class

An S4 class to represent composite ready data

Density Plot for a Long Dataset

Score the MetSSS

mahalanobisComposite

Score Data Using the Mahalanobis Distance

factorComposite

Score Data Using a Factor Model

Drop unnecessary data from a MahalanobisComposite object.

MahalanobisScores-class

An S4 class to represent composite scores based on Mahalanobis distance

Internal function to prepare data for prediction

Biomarker Thresholds Database

prepareComposite

Prepare distance scores on data in preparation for composite scoring

CompositeData-class

A S4 class to represent data for creating a composite

.preparePredict

Internal function to prepare data for prediction

Score Data Using a simple sum

An constructor function for the S4 CompositeData class