ptm (version 0.2.2)

pdb.seq: Get Chain Sequences

Description

Gets the sequences of the chain find in a given PDB.

Usage

pdb.seq(pdb)

Arguments

pdb

the 4-letter PDB identifier.

Value

Returns a dataframe with as many rows as different chains are present in the PDB. For each row six variables are returned: (i) the entry id, (ii) the entity id, (iii) the chain, (iv) the protein name, (v) the species and (vi) the sequence.

Examples

# NOT RUN {
pdb.seq('1bpl')
# }