ptm (version 0.2.2)

sni.scan: Scan a Protein in Search of S-nitrosylation Sites

Description

Scans the indicated protein in search of S-nitrosylation sites.

Usage

sni.scan(up_id, db = 'all')

Arguments

up_id

a character string corresponding to the UniProt ID.

db

the database where to search. It should be one among 'PSP', 'dbPTM', 'all'.

Value

Returns a dataframe where each row corresponds to a modifiable residue.

References

Huang et al. Nucleic Acids Res. 2019 47:D298-D308, (PMID: 30418626).

See Also

meto.scan(), ac.scan(), me.scan(), ub.scan(), su.scan(), gl.scan(), p.scan(), ni.scan(), ptm.scan(), reg.scan(), dis.scan()

Examples

# NOT RUN {
sni.scan('P01009')
# }