ptm (version 0.2.2)

species.kegg: Convert Between Species Name and KEGG 3-Letter Code Format

Description

Converts between species name and KEGG 3-letter code format.

Usage

species.kegg(organism, from = 'scientific')

Arguments

organism

character string defining the organisms.

from

string indicating the character of the provided name. It should be one of 'vulgar', 'scientific', '3-letter'.

Value

Returns a dataframe with the entries matching the request.

See Also

id.features(), species.mapping()

Examples

# NOT RUN {
species.kegg('chempanzee', from = 'vulgar')
# }
# NOT RUN {
species.kegg('Pan paniscus')
# }
# NOT RUN {
species.kegg('ppo', from = '3-letter')
# }