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pvclust (version 2.2-0)

Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling

Description

An implementation of multiscale bootstrap resampling for assessing the uncertainty in hierarchical cluster analysis. It provides SI (selective inference) p-value, AU (approximately unbiased) p-value and BP (bootstrap probability) value for each cluster in a dendrogram.

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Version

Install

install.packages('pvclust')

Monthly Downloads

3,807

Version

2.2-0

License

GPL (>= 2)

Maintainer

Ryota Suzuki

Last Published

November 19th, 2019

Functions in pvclust (2.2-0)

plot.pvclust

Draws Dendrogram with P-values for Pvclust Object
pvclust

Calculating P-values for Hierchical Clustering
seplot

Diagnostic Plot for Standard Error of p-value
msplot

Drawing the Results of Curve Fitting for Pvclust Object
pvpick

Find Clusters with High/Low P-values
msfit

Curve Fitting for Multiscale Bootstrap Resampling
print.pvclust

Print Function for Pvclust Object
lung

DNA Microarray Data of Lung Tumors