plotBayes

internal

Provides an infrastructure for efficient processing of large-scale genetic and phenotypic data including core functions for: 1) fitting linear mixed models, 2) constructing marker-based genomic relationship matrices, 3) estimating genetic parameters (heritability and correlation), 4) performing genomic prediction and genetic risk profiling, and 5) single or multi-marker association analyses.
Rohde et al. (2019) <doi:10.1101/503631>.

Peter Soerensen

Statistical Tools for Quantitative Genetic Analyses

Palle Duun Rohde

Izel Fourie Soerensen

plotBayes function

<dl><dt>fit</dt>
<dd>object from gbayes</dd>
<dt>causal</dt>
<dd>indices for "causal" markers</dd>
<dt>what</dt>
<dd>character fro what to plot (e.g. "trace", "bpm", "ve", "vg", "vb")</dd>
<dt>chr</dt>
<dd>chromosome to plot</dd></dl>

Arguments

Plot fit from gbayes — plotBayes

<dl>

<dt>fit</dt>
<dd>object from gbayes</dd>


<dt>causal</dt>
<dd>indices for "causal" markers</dd>


<dt>what</dt>
<dd>character fro what to plot (e.g. "trace", "bpm", "ve", "vg", "vb")</dd>


<dt>chr</dt>
<dd>chromosome to plot</dd>

</dl>

plotBayes: Plot fit from gbayes

Description

Usage

Arguments