rnag

Compute Nagelkerke R2 ££ perhaps add: r2nag?

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Provides an infrastructure for efficient processing of large-scale genetic and phenotypic data including core functions for: 1) fitting linear mixed models, 2) constructing marker-based genomic relationship matrices, 3) estimating genetic parameters (heritability and correlation), 4) performing genomic prediction and genetic risk profiling, and 5) single or multi-marker association analyses.
Rohde et al. (2019) <doi:10.1101/503631>.

Peter Soerensen

Statistical Tools for Quantitative Genetic Analyses

Palle Duun Rohde

Izel Fourie Soerensen

rnag function

<dl><dt>yobs</dt>
<dd>is a vector of observed phenotypes</dd>
<dt>ypred</dt>
<dd>is a vector of predicted phenotypes</dd></dl>

Arguments

Compute Nagelkerke R2 — rnag

<dl>

<dt>yobs</dt>
<dd>is a vector of observed phenotypes</dd>


<dt>ypred</dt>
<dd>is a vector of predicted phenotypes</dd>

</dl>

rnag: Compute Nagelkerke R2

Description

Usage

Arguments