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qpcR (version 1.3-7.1)

AICc: Akaike's second-order corrected Information Criterion

Description

Calculates the second-order corrected Akaike Information Criterion for objects of class pcrfit, nls, lm, glm or any other models from which coefficients and residuals can be extracted. This is a modified version of the original AIC which compensates for bias with small $n$. As qPCR data usually has $\frac{n}{k} < 40$ (see original reference), AICc was implemented to correct for this.

Usage

AICc(object)

Arguments

object
a fitted model.

Value

  • The second-order corrected AIC value.

Details

Extends the AIC such that $$AICc = AIC+\frac{2k(k + 1)}{n - k - 1}$$ with $k$ = number of parameters, and $n$ = number of observations. For large $n$, AICc converges to AIC.

References

Akaike Information Criterion Statistics. Sakamoto Y, Ishiguro M and Kitagawa G. D. Reidel Publishing Company (1986). Regression and Time Series Model Selection in Small Samples. Hurvich CM & Tsai CL. Biometrika (1989), 76: 297-307.

See Also

AIC, logLik.

Examples

Run this code
m1 <- pcrfit(reps, 1, 2, l5)
AICc(m1)

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