setqreportOption

Set qreport options, assigning certain defaults

Provides statistical components, tables, and graphs
that are useful in 'Quarto' and 'RMarkdown' reports and that produce 'Quarto'
elements for special formatting such as tabs and marginal notes and graphs.
Some of the functions produce entire report sections with tabs, e.g.,
the missing data report created by missChk().  Functions for inserting
variables and tables inside 'graphviz' and 'mermaid' diagrams are included,
and so are special clinical trial graphics for adverse event reporting.

Frank Harrell Jr

qreport

Statistical Reporting with 'Quarto'

setqreportOption function

<dl><dt>...</dt>
<dd>a series of options for which non-default values are desired:<ul>
<li><code>tx.pch</code>: symbols corresponding to treatments</li>
<li><code>tx.col</code>: colors corresponding to treatments</li>
<li><code>tx.linecol</code>: colors for lines in line plots</li>
<li><code>nontx.col</code>: colors for categories other than treatments</li>
<li><code>tx.lty</code>: line types corresponding to treatments</li>
<li><code>tx.lwd</code>: line widths corresponding to treatments</li>
<li><code>tx.var</code>: character string name of treatment variable</li>
<li><code>er.col</code>: 2-vector with names <code>"enrolled","randomized"</code> containing colors to use for enrolled and randomized in needle displays</li>
<li><code>alpha.f</code>: single numeric specifying alpha adjustment to be applied to all colors. Default is 1 (no adjustment)</li>
<li><code>denom</code>: named vector with overall sample sizes
See https://github.com/plotly/plotly.py/blob/master/plotly/colors.py#L83-L87/</li>
</ul></dd>
<dt>study</dt>
<dd>an optional study mnemonic (character string) needed when multiple studies are being analyzed (or when one study is divided into distinct strata)</dd></dl>

Arguments

Set qreport Options — setqreportOption

<dl>

<dt>...</dt>
<dd>a series of options for which non-default values are desired:<ul>
<li><code>tx.pch</code>: symbols corresponding to treatments</li>
<li><code>tx.col</code>: colors corresponding to treatments</li>
<li><code>tx.linecol</code>: colors for lines in line plots</li>
<li><code>nontx.col</code>: colors for categories other than treatments</li>
<li><code>tx.lty</code>: line types corresponding to treatments</li>
<li><code>tx.lwd</code>: line widths corresponding to treatments</li>
<li><code>tx.var</code>: character string name of treatment variable</li>
<li><code>er.col</code>: 2-vector with names <code>"enrolled","randomized"</code> containing colors to use for enrolled and randomized in needle displays</li>
<li><code>alpha.f</code>: single numeric specifying alpha adjustment to be applied to all colors. Default is 1 (no adjustment)</li>
<li><code>denom</code>: named vector with overall sample sizes
See https://github.com/plotly/plotly.py/blob/master/plotly/colors.py#L83-L87/</li>
</ul></dd>


<dt>study</dt>
<dd>an optional study mnemonic (character string) needed when multiple studies are being analyzed (or when one study is divided into distinct strata)</dd>

</dl>

setqreportOption: Set qreport Options

Description

Usage

Value

Arguments

Examples