qrqc (version 1.26.0)

plotGC-methods: Plot per Base GC Content by Position

Description

plotGC plots the GC proportion by position.

Usage

plotGC(obj)

Arguments

obj

an S4 object of class that inherits from SequenceSummary (either FASTASummary or FASTQSummary) from readSeqFile.

See Also

gcPlot

Examples

## Not run: 
#   ## Load a FASTQ file, with sequence hashing.
#   s.fastq <- readSeqFile(system.file('extdata', 'test.fastq', package='qrqc'))
# 
#   ## Plot Qualities
#   plotGC(s.fastq)
# ## End(Not run)