qtl (version 1.66)

c.scanone: Combine columns from multiple scanone results

Description

Concatenate the columns from different runs of scanone.

Usage

# S3 method for scanone
c(..., labels)
# S3 method for scanone
cbind(..., labels)

Value

The concatenated input, as a scanone object.

Arguments

...

A set of objects of class scanone. (This can also be a list of scanone objects.) These are the results from scanone (with n.perm=0), generally run with different phenotypes or methods. All must conform with each other, meaning that calc.genoprob and/or sim.geno were run with the same values for step and off.end and with data having the same genetic map.

labels

A vector of character strings, of length 1 or of the same length as the input, to be appended to the column names in the output.

Author

Karl W Broman,

Details

The aim of this function is to concatenate the results from multiple runs scanone, generally for different phenotypes and/or methods, to be used in parallel with summary.scanone.

See Also

summary.scanone, scanone, cbind.scanoneperm

Examples

data(fake.f2)
fake.f2 <- calc.genoprob(fake.f2)
fake.f2 <- subset(fake.f2, chr=18:19)
out.hk <- scanone(fake.f2, method="hk")
out.np <- scanone(fake.f2, model="np")

out <- c(out.hk, out.np, labels=c("hk","np"))
plot(out, lod=1:2, col=c("blue", "red"))