geno.crosstab

Create a cross tabulation of the genotypes at a pair of markers.

utilities

Analysis of experimental crosses to identify genes
(called quantitative trait loci, QTLs) contributing to variation in
quantitative traits.
Broman et al. (2003) <doi:10.1093/bioinformatics/btg112>.

Karl Broman

Tools for Analyzing QTL Experiments

geno.crosstab function

<dl> <dt>cross</dt>
<dd>An object of class <code>cross</code>. See
 <code>read.cross</code> for details.</dd> <dt>mname1</dt>
<dd>The name of the first marker (as a character
 string). (Alternatively, a vector with the two character strings, in
 which case <code>mname2</code> should not be given.)</dd> <dt>mname2</dt>
<dd>The name of the second marker (as a character string).</dd> <dt>eliminate.zeros</dt>
<dd>If TRUE, don't show the rows and columns that
 have no data.</dd></dl>

Arguments

Karl W Broman, <a href="/link/broman%40wisc.edu?package=qtl&version=1.66" data-mini-rdoc="qtl::broman@wisc.edu">broman@wisc.edu</a>

Author

Create table of two-locus genotypes — geno.crosstab

<dl>

 <dt>cross</dt>
<dd>An object of class <code>cross</code>. See
 <code>read.cross</code> for details.</dd>

 <dt>mname1</dt>
<dd>The name of the first marker (as a character
 string). (Alternatively, a vector with the two character strings, in
 which case <code>mname2</code> should not be given.)</dd>

 <dt>mname2</dt>
<dd>The name of the second marker (as a character string).</dd>

 <dt>eliminate.zeros</dt>
<dd>If TRUE, don't show the rows and columns that
 have no data.</dd>

</dl>

Karl W Broman, <a href='mailto:broman@wisc.edu'>broman@wisc.edu</a>

geno.crosstab: Create table of two-locus genotypes

Description

Usage

Value

Arguments

Author

See Also

Examples