plot.scanoneperm

Plot a histogram of the permutation results from a single-QTL genome
 scan.

hplot

Analysis of experimental crosses to identify genes
(called quantitative trait loci, QTLs) contributing to variation in
quantitative traits.
Broman et al. (2003) <doi:10.1093/bioinformatics/btg112>.

Karl Broman

Tools for Analyzing QTL Experiments

plot.scanoneperm function

<dl> <dt>x</dt>
<dd>An object of class <code>"scanoneperm"</code>, as output by
 <code>scanone</code> when <code>n.perm</code> is specified.</dd> <dt>lodcolumn</dt>
<dd>This indicates the LOD score column to plot. This
 should be a single number between 1 and the number of LOD columns in
 the object input.</dd> <dt>...</dt>
<dd>Passed to the function <code><a href="/link/hist?package=qtl&version=1.66" data-mini-rdoc="qtl::hist">hist</a></code> when it
 is called.</dd></dl>

Arguments

Karl W Broman, <a href="/link/broman%40wisc.edu?package=qtl&version=1.66" data-mini-rdoc="qtl::broman@wisc.edu">broman@wisc.edu</a>

Author

Plot permutation results for a single-QTL genome scan — plot.scanoneperm

<dl>

 <dt>x</dt>
<dd>An object of class <code>"scanoneperm"</code>, as output by
 <code>scanone</code> when <code>n.perm</code> is specified.</dd>

 <dt>lodcolumn</dt>
<dd>This indicates the LOD score column to plot. This
 should be a single number between 1 and the number of LOD columns in
 the object input.</dd>

 <dt>...</dt>
<dd>Passed to the function <code><a href='https://rdrr.io/r/graphics/hist.html'>hist</a></code> when it
 is called.</dd>

</dl>

Karl W Broman, <a href='mailto:broman@wisc.edu'>broman@wisc.edu</a>

plot.scanoneperm: Plot permutation results for a single-QTL genome scan

Description

Usage

Value

Arguments

Author

Details

See Also

Examples